Position Title
Associate Professor
Position Title
Associate Professor
- Biomedical Engineering & Genome Center
She/Her/Hers
- saviran@ucdavis.edu
- https://faculty.engineering.ucdavis.edu/aviran/
- https://aviranlab.bme.ucdavis.edu/
2319 Genome & Biomedical Sciences Facility,
Davis CA 95616
Bio
Research Areas
- Statistical Learning
- Structural Biology
- Methods for Genomic Data Analysis
- RNA Biology and Medicine
- Methods for RNA Design
Publications
- Designer artificial environments for membrane protein synthesis
Journal Article | Meyer, C., Arizzi, A., Henson, T., Aviran, S., Longo, M., Wang, A., Tan, C. Nature Communications, 16, 4363. 10.1038/s41467-025-59471-1 - Evaluation of novel computational methods to identify RNA-binding protein footprints from structural data.
Journal Article | Mizrahi, O., Corley, M., Feldman, O., Fröhlking, T., Sun, L., Ziesel, A., Antczak, M., Bernetti, M., Elhajjajy, S., Huang, W., Nguyen, G., Park, S., Perez Martell, R., Trinity, L., Xu, K., Zok, T., Bussi, G., Jabbari, H., Orenstein, Y., Aviran, S., Meyer, M., Yeo, G. RNA, 31, 1103-1124. 10.1261/rna.080215.124 - Computational Approaches for RNA Structure Ensemble Deconvolution from Structure Probing Data
Journal Article | Aviran, S., Incarnato, D. Journal of Molecular Biology, 434, 167635. 10.1016/j.jmb.2022.167635 - Multiomic analysis for optimization of combined focal and immunotherapy protocols in murine pancreatic cancer
Journal Article | Wang, J., Fite, B., Kare, A., Wu, B., Raie, M., Tumbale, S., Zhang, N., Davis, R., Tepper, C., Aviran, S., Newman, A., King, D., Ferrara, K. Theranostics, 12, 7884-7902. 10.7150/thno.73218 - Accurate detection of RNA stem-loops in structurome data reveals widespread association with protein binding sites
Journal Article | Radecki, P., Uppuluri, R., Deshpande, K., Aviran, S. RNA Biology, 18, 521-536. 10.1080/15476286.2021.1971382 - See publications and more on Aggie Experts: https://experts.ucdavis.edu/expert/gnpl4EGg